PorcineSNP60 (12-sample)
PorcineSNP60 (12-sample)
The PorcineSNP60 DNA Analysis Kit v2 features 65,000 evenly spaced probes, offering more than sufficient SNP density for whole-genome association studies, determination of genetic merit, identification of quantitative trait loci, and comparative genetic studies. This 24-sample BeadChip presents a superior solution for interrogating genetic variation in multiple porcine breeds, including Duroc, Landrace, Pietran, and Large White. A semi-custom version of the BeadChip, the PorcineSNP60+ DNA Analysis Kit v2, allows researchers to include up to 25,000 additional custom probes for targeted studies.
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| Specifications | ||||
|---|---|---|---|---|
| Number of Fixed Markers | 64,232 | Wageningen Univ; ILMN GA seqences/pilot | 43,582/3,422 | |
| Additional Custom Markers max. | 25,000 | DIAS/INRA/ISU | 1,202/2,528/37 | |
| Number of Samples | 12 | MARC/Roslin, Sanger UMB, Norway/Other |
12,121/324 35/981 |
|
| DNA Requirement | 200 ng | Polymorphic Loci (MAF>0.05) |
55,210 | |
| Assay | Infinium HD Ultra | MAF | Mean/Median 0.28/0.29 |
|
| FFPE compatible | Yes | Mendelian Inconsistencies | 0.08/<0.1 | |
| Spacing (kb) | Mean/Median 43.4/27.9 |
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Product and Ordering Information
- PorcineSNP60 Whole-Genome Genotyping Kits: WG-410-2001 (48 Samples), WG-410-2002 (288 Samples), WG-420-2003 (1152 Samples).
- PorcineSNP60+ Whole-Genome Genotyping Kits: WG-410-2005 (48 Samples), WG-410-2006 (288 Samples), WG-420-2007 (1152 Samples).
- PorcineSNP60 Product Page
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