The AmpliSeq for Illumina Cancer Hotspot Panel v2 is a targeted resequencing assay for detecting somatic mutations across the hotspot regions of 50 genes with known acludes AmpliSeq for Illumina PCR-based library preparation, Illumina sequencing by synthesis (SBS) chemistry and next-generation sequencing (NGS) technology, and automated analysis with cloud-based BaseSpace Sequence Hub and BaseSpace Variant Interpreter, or local, on-instrument options. Starting with as little as 10 ng input DNA, the panel enables highly sensitive mutation detection within multiple cancer types, including lung, colon, breast, ovarian, melanoma, and prostate. The low-input requirement enables use with various sample types, including formalin-fixed, paraffin-embedded (FFPE) tissues.ssociations to cancer. The Cancer Hotspot Panel is part of a streamlined workflow that includes AmpliSeq for Illumina PCR-based library preparation, Illumina sequencing by synthesis (SBS) chemistry and next-generation sequencing (NGS) technology, and automated analysis with cloud-based BaseSpace Sequence Hub and BaseSpace Variant Interpreter, or local, on-instrument options. Starting with as little as 10 ng input DNA, the panel enables highly sensitive mutation detection within multiple cancer types, including lung, colon, breast, ovarian, melanoma, and prostate. The low-input requirement enables use with various sample types, including formalin-fixed, paraffin-embedded (FFPE) tissues.
Species Compatibility | Human | |||||||
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Recommended Illumina Instrument* | MiniSeq | MiSeq | iSeq 100 | |||||
Recommended Samples per run† | Mid Output | High Output | v2 Nano | v2 Micro | v2 | v3 | 16 | |
32 | 96 | 4 | 16 | 60 | 96 | |||
Max Recommended Read Length | 2×150 | |||||||
Recommended Secondary Analysis | DNA Amplicon App, DNA Amplicon Module | |||||||
Recommended Down Stream Analysis | Variant Interpreter |
* Library prep is compatible with all Illumina instruments. Recommended instruments chosen based on typical output and analysis need for selected application.
† Assumes minimum coverage of 500×
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