Each iSeq 100 System is delivered with Local Run Manager software already installed on the instrument. Local Run Manager makes it easy to plan experiments, monitor sequencing runs as they progress, and analyze data after sequencing is complete. It integrates with the instrument control software and is easily accessed through a web browser, with a user-friendly touch screen.
When starting a sequencing run on the iSeq 100 System, simply select the appropriate analysis module and library preparation kit used in your experiment. The software automatically performs on-instrument data analysis after sequencing completes and delivers results in intuitive reports. These reports can be viewed on the iSeq 100 System itself, or remotely from a computer on the same local area network. Local Run Manager currently offers the following analysis modules.
Analyzes and generates a filtered report for samples prepared using the TruSightTumor 15 assay for 15 genes associated with solid tumors.View sample data
Aligns reads and outputs hits. Performs optional novel precursor discovery and pairwise differential expression analysis.View sample data
Aligns reads and detects fusions for RNA libraries prepared with the TruSight RNA Fusion Panel kit.View sample data
Aligns reads and performs variant analysis for whole-genome sequencing of small genomes.View sample data
Aligns reads against a whole genome reference and performs variant analysis for specified regions of interest.View sample data
Enables streamlined differential expression analysis of AmpliSeq for Illumina RNA targeted panels sequenced on Illumina sequencing systems.View sample data
Generates demultiplexed FASTQ files for further downstream analysis.View sample data
Enables streamlined variant detection of AmpliSeq for Illumina DNA and TruSeq Amplicon panels sequenced on Illumina sequencing systems.View sample data
Enables streamlined variant detection of TruSeq Amplicon panels sequenced on Illumina sequencing systems.View sample data
Enables streamlined analysis of the Illumina TruSight Tumor 26 and dual pool (dual strand) TruSeq Custom Amplicon panels.View sample data
Enables streamlined differential expression analysis of TruSeq Targeted RNA panels sequenced on Illumina sequencing systems.View sample data
Download a specific analysis software module or access Local Run Manager technical support information.
Interested in designing custom assays or taking data analysis further? The iSeq 100 System is also compatible with the following Illumina software solutions.
DesignStudio Software guides you through creation of custom sequencing and microarray assays. This web-based assay design tool streamlines the selection of targets, submission and review of designs, and purchase of complete kits.Learn More
BaseSpace Sequence Hub is a powerful computing environment for analyzing, managing, and sharing data. It integrates with Illumina instruments, so you can set up runs, monitor progress, and stream data directly to the cloud. BaseSpace Sequence Hub also provides access to a curated set of data analysis apps.Learn More
BaseSpace Clarity LIMS is a laboratory information management system that helps labs track samples and optimize procedures and workflows. It automates routine tasks and integrates with your laboratory’s ecosystem.Learn More