All Systems

MiniSeq System

Get Hands-on with the MiniSeq System
Get Hands-on with the MiniSeq System

Take a virtual tour of the MiniSeq System. Set up and perform a run and see for yourself how intuitive and simple sequencing can be.

Achieve More Efficient Tumor Profiling
Achieve More Efficient Tumor Profiling

See how this simpler, streamlined sample analysis technique compares to traditional methods, as an everyday tool for efficient tumor profiling.

Webster University Experiences the MiniSeq System
Webster University Experiences the MiniSeq System

Students and professors at Webster University share how having a MiniSeq System on campus has opened up new possibilities for their research.

The Illumina Community

The Illumina Community

Join other Illumina customers in the Illumina Online Community. Collaborate with Illumina moderators, customers, and developers. Discuss best practices, troubleshoot, and learn about how others are using Illumina sequencers, library preparation kits, and automated data analysis to fuel their research.

Join Now

An Affordable Benchtop Sequencer

The MiniSeq System delivers the power and confidence of proven Illumina next-generation sequencing (NGS) technology in an accessible sequencing solution. It features cost-efficient sequencing, even for low numbers of samples. Its streamlined workflow enables rapid sequencing of both DNA and RNA. The small footprint allows it to fit seamlessly into laboratories, with no need for specialized, ancillary equipment.

Next: Flexible NGS System for Multiple Applications

Flexible NGS System for Multiple Applications

The MiniSeq System offers cross-application flexibility, enabling researchers to transition easily between sequencing projects for both DNA and RNA applications, including signal transduction pathway profiling, solid and hematological tumor profiling, and germline mutation analysis. Optimized data analysis workflows are available for a growing ecosystem of applications.

Explore Applications

Next: Simple Library-to-Results NGS Workflow

Simple Library-to-Results NGS Workflow

The MiniSeq System combines load-and-go operation with an intuitive user interface for a fast, easy NGS workflow. The MiniSeq System integrates clonal amplification, sequencing by synthesis, and base calling into a single benchtop instrument, eliminating the need for additional equipment. Simply load the flow cell and reagent cartridge on to the MiniSeq System and sequence at the touch of a button.

Next: User-Friendly, Intuitive Software

User-Friendly, Intuitive Software

The MiniSeq System features a touch screen interface and user-friendly, intuitive software. Use the onboard software suite to configure, launch, monitor, and analyze sequencing runs. Interface with the MiniSeq System from any web browser to review real-time data and performance metrics. BaseSpace Sequence Hub lets you easily and securely analyze, archive, and share sequencing data. It simplifies and accelerates informatics with push-button tools.

Learn More

Start Over: Our Most Affordable Benchtop Sequencer
  1.  
  2.  
  3.  
  4.  

Workflow

 
Prep

Optimized library preparation kits for either RNA or DNA support a diverse range of targeted applications.

 
Sequence

With an intuitive user interface and load-and-go operation, it takes less than 5 minutes to load and set up a MiniSeq System. Sequencing is complete in < 1 day.

 
Analyze

Configure, launch, monitor, and analyze sequencing runs using the onboard software suite.

 
Share

Interface with the MiniSeq System from any web browser to review real-time data and performance metrics.

See MiniSeq Application-Specific Workflows

System Specifications

1.65-7.5 Gb

output range

7-25 million

reads per run

2 × 150 bp

max read length
View All MiniSeq Specifications

Customer Stories

Illumina Go Mini Scientific Challenge 1st Place Winner
Illumina Go Mini Scientific Challenge 1st Place Winner

Illumina launched the Go Mini Scientific Challenge to highlight the range of applications that can be performed using the Illumina MiniSeq System. First place winner, Mattia Prosperi, PhD, describes how he will use his MINI Cooper and MiniSeq to study the spread of mosquito-borne pathogens in Florida.

View Video
Identifying Breast Cancer Targets Using High-Throughput NGS

The Breast Cancer Atlas Project is sequencing more than a million breast cancer cells with the NovaSeq 6000 System.

Read Article
Bringing Bioinformatics Pipeline In-House Reduces Costs and Decreases Turnaround Time

Phosphorus uses the DRAGEN Bio-IT Platform to perform genomics data analysis onsite and at an accessible price point.

Read Article
Read More Stories
Interested in receiving newsletters, case studies, and information from Illumina based on your area of interest? Sign up now.

Featured Products

MiniSeq Reagent Kit
MiniSeq Reagent Kit

MiniSeq Reagent Kits bring the power of Illumina NGS to labs of all sizes. Access cost-efficient sequencing, even for low numbers of samples.

View Product
Nextera XT DNA Library Preparation Kit
Nextera XT DNA Library Preparation Kit

Prepare sequencing libraries for small genomes, PCR amplicons, plasmids, or cDNA in as little as 90 minutes, with a low DNA input requirement.

View Product
TruSeq Small RNA Library Preparation Kits
TruSeq Small RNA Library Preparation Kits

These kits provide a simple, cost-effective solution for generating miRNA and small RNA sequencing libraries directly from total RNA, for any species.

View Product

Related Solutions

Innovative technologies

At Illumina, our goal is to apply innovative technologies to the analysis of genetic variation and function, making studies possible that were not even imaginable just a few years ago. It is mission critical for us to deliver innovative, flexible, and scalable solutions to meet the needs of our customers. As a global company that places high value on collaborative interactions, rapid delivery of solutions, and providing the highest level of quality, we strive to meet this challenge. Illumina innovative sequencing and array technologies are fueling groundbreaking advancements in life science research, translational and consumer genomics, and molecular diagnostics.

For Research Use Only. Not for use in diagnostic procedures (except as specifically noted).

© 2020 Illumina, Inc. All rights reserved.

All trademarks are the property of Illumina, Inc. or their respective owners.
For specific trademark information, see emea.illumina.com/company/legal.html.

Your Privacy Is Important

At Illumina, we believe responsible data stewardship is essential to promote trust and support innovation. For more details, you may review our Privacy Policy.

California Consumer Privacy Act

California residents may request that we disclose information collected in the normal course of business and how that information is used to personalize your experience. To review or change how this data is used, you may make a request through this Web Form or call +1 (888) 914-9661, PIN: 320 533. Illumina uses OneTrust, a privacy management software tool, to handle your request. You may receive emails through the OneTrust system as your request is processed. If you have any questions, you may contact the Illumina Privacy Team at privacy@illumina.com.

Update subscription preferences Privacy Policy